Miyakogusa Predicted Gene

Lj0g3v0341889.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LB84_SOYBN 714 69.7 79.0 (tr|I1LB84) Pectinesterase OS=Glycine max PE=3 SV=2
TAIR_pep AT4G02330.1 488 47.7 60.1 | Symbols: ATPMEPCRB | Plant invertase/pectin methylesterase inhibitor superfamily | chr4:1032479-1034928 FORWARD LENGTH=573
Medicago Medtr1g083520.1 667 66.5 76.9 | pectinesterase/pectinesterase inhibitor | HC | chr1:37167087-37164769 | 20130731
Soybean Glyma10g29150.1 713 69.7 79.0  
LJGI gnl|LJGI|TC79941 73.8 90.2 90.2 similar to UniRef100_A0ZNJ9 Cluster: Pectin methylesterase 1; n=1; Pyrus communis|Rep: Pectin methylesterase 1 - Pyrus communis (Pear), partial (40%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0341889.1 length: 537 aa.
IPR000070 Pectinesterase, catalytic
method AccNumber shortName E-value location
Cellular Component GO:0005618 cell wall    
Molecular Function GO:0030599 pectinesterase activity    
Biological Process GO:0042545 cell wall modification    
HMMPfam PF01095 Pectinesterase 4.7e-134 223-522
IPR006501 Pectinesterase inhibitor
Molecular Function GO:0004857 enzyme inhibitor activity    
Molecular Function GO:0030599 pectinesterase activity    
Gene3D G3DSA:1.20.140.40 no description 6.6e-23 36-186
HMMPfam PF04043 PMEI 5.3e-23 30-181
HMMSmart SM00856 Plant 1e-24 29-182
HMMTigr TIGR01614 PME_inhib: 8.8e-19 14-183
superfamily SSF101148 Plant 3.9e-22 31-187
IPR011050 Pectin lyase fold/virulence factor
superfamily SSF51126 Pectin 3.7e-107 215-537
IPR012334 Pectin lyase fold
Gene3D G3DSA:2.160.20.10 no description 2.4e-119 218-534
IPR018040 Pectinesterase, active site
PatternScan PS00503 PECTINESTERASE_2 NA 369-378
no_ID  
HMMPanther PTHR31707 FAMILY 1.8e-236 38-537
HMMPanther PTHR31707:SF0 SUBFAMILY 1.8e-236 38-537
Seg seg seg NA 7-37
189-200
237-264
Putative transmembrane regions
  From To
TM segments
SOSUI		 9 31
Wolf-PSORT
Lj0g3v0341889.1	chlo 6, vacu 3, chlo_mito 3, extr 2, E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0341889.1