Miyakogusa Predicted Gene

Lj0g3v0341879.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KGW7_SOYBN 475 72.4 82.1 (tr|I1KGW7) Pectinesterase OS=Glycine max PE=3 SV=1
TAIR_pep AT3G05610.1 276 45.9 68.7 | Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily | chr3:1625876-1627976 REVERSE LENGTH=669
Medicago Medtr1g083500.1 427 65.7 78.9 | pectinesterase/pectinesterase inhibitor | HC | chr1:37158150-37160011 | 20130731
Soybean Glyma0248s00220.1 475 72.7 82.8  
LJGI gnl|LJGI|FS339092 658 86.6 86.6 similar to UniRef100_A7Q8F9 Cluster: Chromosome chr5 scaffold_64, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_64, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0341879.1 length: 328 aa.
IPR000070 Pectinesterase, catalytic
method AccNumber shortName E-value location
Cellular Component GO:0005618 cell wall    
Molecular Function GO:0030599 pectinesterase activity    
Biological Process GO:0042545 cell wall modification    
HMMPfam PF01095 Pectinesterase 1.2e-24 258-327
IPR006501 Pectinesterase inhibitor
Molecular Function GO:0004857 enzyme inhibitor activity    
Molecular Function GO:0030599 pectinesterase activity    
Gene3D G3DSA:1.20.140.40 no description 5.8e-34 56-211
HMMPfam PF04043 PMEI 9.1e-30 57-206
HMMSmart SM00856 Plant 9.6e-37 54-206
HMMTigr TIGR01614 PME_inhib: 8.2e-26 53-210
superfamily SSF101148 Plant 8.2e-29 56-213
IPR011050 Pectin lyase fold/virulence factor
superfamily SSF51126 Pectin 2.1e-21 251-326
IPR012334 Pectin lyase fold
Gene3D G3DSA:2.160.20.10 no description 6.6e-21 256-326
no_ID  
HMMPanther PTHR31707 FAMILY 3.3e-89 1-328
HMMPanther PTHR31707:SF0 SUBFAMILY 3.3e-89 1-328
Seg seg seg NA 17-33
Putative transmembrane regions
  From To
TM segments
SOSUI		 12 34
Wolf-PSORT
Lj0g3v0341879.1	extr 4, cyto 3, E.R. 3, cyto_E.R. 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0341879.1