Miyakogusa Predicted Gene

Lj0g3v0341679.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7MD91_SOYBN 414 60.9 71.5 (tr|K7MD91) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT2G40070.1 75.5 40.5 58.7 | Symbols: | BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr2:16728378-16731160 REVERSE LENGTH=607

Medicago Medtr8g040940.2 372 56.4 69.1 | hypothetical protein | LC | chr8:15354196-15357869 | 20130731

Soybean Glyma15g36290.1 235 59.3 69.9

LJGI gnl|LJGI|TC82779 1752 99.7 99.7 homologue to UniRef100_A7Q3F2 Cluster: Chromosome chr13 scaffold_48, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_48, whole genome shotgun sequence - Vitis vinifera (Grape), partial (6%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0341679.1 length: 373 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 267-282
297-307

Wolf-PSORT

Lj0g3v0341679.1 nucl 12.5, cyto_nucl 7

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0341679.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7MD91_SOYBN	414	60.9	71.5	(tr\|K7MD91) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT2G40070.1	75.5	40.5	58.7	\| Symbols: \| BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). \| chr2:16728378-16731160 REVERSE LENGTH=607
Medicago	Medtr8g040940.2	372	56.4	69.1	\| hypothetical protein \| LC \| chr8:15354196-15357869 \| 20130731
Soybean	Glyma15g36290.1	235	59.3	69.9
LJGI	gnl\|LJGI\|TC82779	1752	99.7	99.7	homologue to UniRef100_A7Q3F2 Cluster: Chromosome chr13 scaffold_48, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr13 scaffold_48, whole genome shotgun sequence - Vitis vinifera (Grape), partial (6%)

no_ID
Lj0g3v0341679.1				length: 373 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	267-282 297-307