Miyakogusa Predicted Gene

Lj0g3v0341609.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MIS9_SOYBN 488 93.4 97.1 (tr|I1MIS9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G61790.1 441 83.5 90.5 | Symbols: | Protein with RING/U-box and TRAF-like domains | chr3:22871974-22873543 REVERSE LENGTH=326
Medicago Medtr3g017590.1 486 93.4 96.3 | ubiquitin ligase SINAT3 | HC | chr3:5040231-5036144 | 20130731
Soybean Glyma15g37920.2 488 93.4 97.1  
LJGI gnl|LJGI|TC78090 698 100.0 100.0 homologue to UniRef100_A8W462 Cluster: SINA3; n=1; Medicago truncatula|Rep: SINA3 - Medicago truncatula (Barrel medic), partial (38%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0341609.1 length: 242 aa.
IPR004162 Seven-in-absentia protein, sina
method AccNumber shortName E-value location
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
Biological Process GO:0007275 multicellular organismal development    
HMMPanther PTHR10315 SEVEN 1.3e-112 1-242
IPR008974 TRAF-like
Molecular Function GO:0005515 protein binding    
superfamily SSF49599 TRAF 1e-47 47-239
IPR013010 Zinc finger, SIAH-type
Molecular Function GO:0008270 zinc ion binding    
ProfileScan PS51081 ZF_SIAH 13.904 47-107
IPR013323 SIAH-type domain
Molecular Function GO:0004842 ubiquitin-protein ligase activity    
Molecular Function GO:0008270 zinc ion binding    
Biological Process GO:0016567 protein ubiquitination    
Gene3D G3DSA:3.90.890.10 no description 5.3e-19 47-102
IPR018121 Seven-in-absentia protein, TRAF-like domain
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
Biological Process GO:0007275 multicellular organismal development    
HMMPfam PF03145 Sina 3.3e-73 36-235
no_ID  
Gene3D G3DSA:2.60.210.10 no description 7.8e-57 112-239
Wolf-PSORT
Lj0g3v0341609.1	nucl 7, cyto 4, plas 1.5, mito_plas 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0341609.1