Miyakogusa Predicted Gene

Lj0g3v0341429.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL G7K2C5_MEDTR 631 84.6 88.9 (tr|G7K2C5) Hexose transporter OS=Medicago truncatula GN=MTR_5g006070 PE=3 SV=1
TAIR_pep AT5G26340.1 584 78.0 86.2 | Symbols: MSS1, STP13, ATSTP13 | Major facilitator superfamily protein | chr5:9243851-9246994 REVERSE LENGTH=526
Medicago Medtr5g006070.1 631 84.6 88.9 | sugar porter (SP) family MFS transporter | HC | chr5:751708-748169 | 20130731
Soybean Glyma01g44930.1 629 84.6 88.9  
LJGI gnl|LJGI|TC62731 2068 100.0 100.0 similar to UniRef100_Q94AZ2 Cluster: Sugar transport protein 13; n=1; Arabidopsis thaliana|Rep: Sugar transport protein 13 - Arabidopsis thaliana (Mouse-ear cress), partial (65%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0341429.1 length: 381 aa.
IPR003663 Sugar/inositol transporter
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
Molecular Function GO:0022891 substrate-specific transmembrane transporter activity    
Biological Process GO:0055085 transmembrane transport    
FPrintScan PR00171 SUGRTRNSPORT 3.2e-16 33-43
137-156
294-304
HMMTigr TIGR00879 SP: 1.4e-90 19-375
IPR005828 General substrate transporter
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0022857 transmembrane transporter activity    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00083 Sugar_tr 4.2e-96 26-369
IPR005829 Sugar transporter, conserved site
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
PatternScan PS00216 SUGAR_TRANSPORT_1 NA 338-355
IPR016196 Major facilitator superfamily domain, general substrate transporter
superfamily SSF103473 MFS 2.4e-47 26-367
IPR020846 Major facilitator superfamily domain
ProfileScan PS50850 MFS 34.305 25-381
no_ID  
Gene3D G3DSA:1.20.1250.20 no description 6.8e-10 34-228
269-368
HMMPanther PTHR24063 FAMILY 3.4e-218 10-379
HMMPanther PTHR24063:SF72 SUBFAMILY 3.4e-218 10-379
Seg seg seg NA 3-12
103-114
212-223
Putative transmembrane regions
  From To
TM segments
SOSUI
16 37
81 103
111 133
138 160
168 190
204 226
295 316
322 344
351 373
Wolf-PSORT
Lj0g3v0341429.1	plas 6, vacu 5, cyto 3, nucl_plas 3, golg_plas 3, cysk_plas 3, E.R._plas 3, mito_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0341429.1