Miyakogusa Predicted Gene
- Lj0g3v0341369.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1K1V6_SOYBN |
229 |
84.1 |
90.9 |
(tr|I1K1V6) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G31660.1 |
182 |
65.9 |
81.8 |
| Symbols: | CONTAINS InterPro DOMAIN/s: Bystin (InterPro:IPR007955); Has 475 Blast hits to 467 proteins in 210 species: Archae - 0; Bacteria - 9; Metazoa - 155; Fungi - 139; Plants - 55; Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink). | chr1:11331176-11333440 REVERSE LENGTH=444 |
| Medicago |
Medtr5g025980.1 |
219 |
79.5 |
87.9 |
| bystin, putative | HC | chr5:10641099-10632301 | 20130731 |
| Soybean |
Glyma05g13330.1 |
229 |
84.1 |
90.9 |
|
| LJGI |
gnl|LJGI|TC60142 |
791 |
100.0 |
100.0 |
similar to UniRef100_A7QN53 Cluster: Chromosome undetermined scaffold_130, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_130, whole genome shotgun sequence - Vitis vinifera (Grape), partial (75%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0341369.1 |
length: 132 aa. |
| IPR007955 |
Bystin |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR12821 |
BYSTIN |
6e-54 |
1-113 |
| HMMPfam |
PF05291 |
Bystin |
1e-42 |
1-102 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
55-76 |
| HMMPanther |
PTHR12821:SF0 |
SUBFAMILY |
6e-54 |
1-113 |
- Wolf-PSORT
Lj0g3v0341369.1 cyto 7, cyto_nucl 5.33333, cyto_E.R. 4.83333, nucl 2.5, E.R. 1.5, chlo 1, mito 1, cysk 1, chlo_mito 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0341369.1 |
|