Miyakogusa Predicted Gene

Lj0g3v0340729.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7L911_MEDTR 273 39.0 53.5 (tr|G7L911) B3 domain-containing protein OS=Medicago truncatula GN=MTR_8g103940 PE=4 SV=1
TAIR_pep AT3G18990.1 100 27.8 40.3 | Symbols: VRN1, REM39 | AP2/B3-like transcriptional factor family protein | chr3:6549077-6551568 REVERSE LENGTH=341
Medicago Medtr1g108780.1 273 38.8 53.6 | transcriptional factor B3 family protein | HC | chr1:49164002-49166141 | 20130731
Soybean Glyma09g20060.1 187 38.8 52.4  
LJGI gnl|LJGI|DC596542 268 87.1 87.1 weakly similar to UniRef100_A2Q2N6 Cluster: Transcriptional factor B3; n=1; Medicago truncatula|Rep: Transcriptional factor B3 - Medicago truncatula (Barrel medic), partial (20%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0340729.1 length: 528 aa.
IPR003340 B3 DNA binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 1.3e-10 14-110
131-223
322-403
447-526
HMMSmart SM01019 B3 2.5e-09 14-110
131-223
320-409
431-528
ProfileScan PS50863 B3 11.053 13-110
130-223
319-409
430-528
IPR015300 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.40.330.10 no description 3.4e-17 9-110
125-223
315-406
424-526
superfamily SSF101936 DNA-binding 1.7e-15 125-231
314-415
423-528
8-118
no_ID  
Seg seg seg NA 250-259
Wolf-PSORT
Lj0g3v0340729.1	chlo 7, cyto 7
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0340729.1