Miyakogusa Predicted Gene

Lj0g3v0340419.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M223_SOYBN 236 47.3 65.6 (tr|K7M223) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G14710.1 87.8 32.5 49.0 | Symbols: | RNI-like superfamily protein | chr3:4941545-4943055 FORWARD LENGTH=442
Medicago Medtr2g082850.1 228 43.9 59.2 | F-box/RNI superfamily protein | LC | chr2:34752262-34750838 | 20130731
Soybean Glyma13g33790.1 209 44.1 61.3  
LJGI gnl|LJGI|TC73194 2115 99.9 99.9 weakly similar to UniRef100_A7QK65 Cluster: Chromosome chr19 scaffold_111, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_111, whole genome shotgun sequence - Vitis vinifera (Grape), partial (15%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0340419.1 length: 357 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 6.8e-06 18-49
ProfileScan PS50181 FBOX 8.544 15-48
superfamily SSF81383 F-box 1.2e-08 13-110
IPR027191 F-box family
HMMPanther PTHR32555 F-BOX 1.9e-22 16-123
no_ID  
Gene3D G3DSA:3.80.10.10 no description 6.3e-07 248-337
Seg seg seg NA 343-357
Wolf-PSORT
Lj0g3v0340419.1	nucl 5.5, cyto_nucl 5.5, cyto 4.5, chlo 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0340419.1