Miyakogusa Predicted Gene

Lj0g3v0340219.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T833_LOTJA 511 94.1 94.8 (tr|I3T833) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G59520.1 414 74.9 86.0 | Symbols: ATRBL13, RBL13 | RHOMBOID-like protein 13 | chr3:21992054-21992863 FORWARD LENGTH=269
Medicago Medtr4g067340.1 481 85.6 92.6 | S54 (rhomboid) subfamily peptidase | HC | chr4:25424578-25426275 | 20130731
Soybean Glyma12g05550.2 486 88.2 93.0  
LJGI gnl|LJGI|TC73053 1562 99.3 99.3  
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0340219.1 length: 271 aa.
IPR022764 Peptidase S54, rhomboid domain
method AccNumber shortName E-value location
Molecular Function GO:0004252 serine-type endopeptidase activity    
Cellular Component GO:0016021 integral to membrane    
Gene3D G3DSA:1.20.1540.10 no description 2.1e-18 13-199
HMMPfam PF01694 Rhomboid 3.7e-22 48-201
no_ID  
HMMPanther PTHR22790 RHOMBOID-RELATED 6.5e-147 6-264
HMMPanther PTHR22790:SF13 SUBFAMILY 6.5e-147 6-264
Seg seg seg NA 98-109
superfamily SSF144091 Rhomboid-like 4.9e-20 13-202
Putative transmembrane regions
  From To
TM segments
SOSUI		 9 30
57 79
92 114
127 149
154 176
181 203
212 234
Wolf-PSORT
Lj0g3v0340219.1	plas 5, cyto 4, nucl 2, vacu 2, cyto_pero 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0340219.1