Miyakogusa Predicted Gene

Lj0g3v0339979.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3SD50_LOTJA 282 100.0 100.0 (tr|I3SD50) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT1G73470.1 198 69.4 84.3 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 72 Blast hits to 72 proteins in 35 species: Archae - 0; Bacteria - 50; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:27625208-27627604 FORWARD LENGTH=351

Medicago --No_Hits--

Soybean Glyma08g06150.1 254 87.3 95.8

LJGI gnl|LJGI|TC69894 815 98.4 98.4 similar to UniRef100_A7QSV7 Cluster: Chromosome undetermined scaffold_163, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_163, whole genome shotgun sequence - Vitis vinifera (Grape), partial (74%)

Putative transmembrane regions

From To

TM segments
SOSUI 10 31

88 110

Wolf-PSORT

Lj0g3v0339979.1 cyto_nucl 6.83333, cyto 5.5, nucl 4, cyto_E.R. 3.83333, chlo 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0339979.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3SD50_LOTJA	282	100.0	100.0	(tr\|I3SD50) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT1G73470.1	198	69.4	84.3	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 72 Blast hits to 72 proteins in 35 species: Archae - 0; Bacteria - 50; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr1:27625208-27627604 FORWARD LENGTH=351
Medicago	--No_Hits--
Soybean	Glyma08g06150.1	254	87.3	95.8
LJGI	gnl\|LJGI\|TC69894	815	98.4	98.4	similar to UniRef100_A7QSV7 Cluster: Chromosome undetermined scaffold_163, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome undetermined scaffold_163, whole genome shotgun sequence - Vitis vinifera (Grape), partial (74%)