Miyakogusa Predicted Gene

Lj0g3v0338819.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LA63_SOYBN 539 68.7 79.9 (tr|K7LA63) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G55060.1 336 48.5 65.4 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58510.1); Has 223 Blast hits to 218 proteins in 80 species: Archae - 0; Bacteria - 2; Metazoa - 117; Fungi - 6; Plants - 65; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). | chr5:22342079-22346400 FORWARD LENGTH=662
Medicago Medtr5g093230.1 504 66.4 77.6 | Rab3 GTPase-activating protein catalytic subunit | HC | chr5:40696171-40704190 | 20130731
Soybean Glyma14g02550.1 518 65.1 77.8  
LJGI gnl|LJGI|BP037804 168 87.6 87.6 similar to UniRef100_A7P0N2 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0338819.1 length: 475 aa.
IPR026147 Rab3 GTPase-activating protein catalytic subunit
method AccNumber shortName E-value location
Molecular Function GO:0005097 Rab GTPase activator activity    
HMMPanther PTHR21422 FAMILY 6.4e-77 176-429
no_ID  
HMMPanther PTHR21422:SF1 SUBFAMILY 6.4e-77 176-429
Seg seg seg NA 15-19
342-349
Putative transmembrane regions
  From To
TM segments
SOSUI		 2 23
Wolf-PSORT
Lj0g3v0338819.1	chlo 10, extr 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0338819.1