Miyakogusa Predicted Gene

Lj0g3v0337989.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MVQ3_SOYBN 948 75.5 81.8 (tr|I1MVQ3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G37460.1 689 54.7 71.2 | Symbols: SRFR1 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:17608623-17615534 REVERSE LENGTH=1052
Medicago Medtr5g016190.2 882 69.5 78.8 | suppressor of RPS4-RLD 1/TPR domain protein | HC | chr5:5750880-5761129 | 20130731
Soybean Glyma17g17920.1 948 75.5 81.8  
LJGI gnl|LJGI|GO010305 999 99.4 99.4  
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0337989.1 length: 623 aa.
IPR001440 Tetratricopeptide TPR-1
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00515 TPR_1 6.4e-05 42-70
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.5e-21 17-112
285-377
378-456
457-554
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 56.521 281-552
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 2.2e-05 38-71
72-105
281-314
315-348
349-382
383-416
417-450
451-484
485-518
519-552
ProfileScan PS50005 TPR 9.440 38-71
281-314
315-348
349-382
383-416
417-450
451-484
485-518
519-552
no_ID  
Coil coil coiled-coil NA 112-133
HMMPanther PTHR23083 TETRATRICOPEPTIDE 4.6e-185 8-623
HMMPanther PTHR23083:SF2 TETRATRICOPEPTIDE 4.6e-185 8-623
HMMPfam PF13414 TPR_11 4.1e-13 287-346
349-413
416-481
488-549
Seg seg seg NA 112-119
139-152
212-233
superfamily SSF48452 TPR-like 3.5e-46 37-568
Wolf-PSORT
Lj0g3v0337989.1	nucl 5, nucl_plas 5, cyto 4, plas 3, mito 1, E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0337989.1