Miyakogusa Predicted Gene

Lj0g3v0337299.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7LWN7_SOYBN 1185 62.8 74.9 (tr|K7LWN7) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT5G17680.1 486 37.3 57.5 | Symbols: | disease resistance protein (TIR-NBS-LRR class), putative | chr5:5822999-5827153 FORWARD LENGTH=1294

Medicago Medtr2g040230.1 1056 57.0 70.5 | disease resistance protein (TIR-NBS-LRR class), putative | LC | chr2:17650494-17654963 | 20130731

Soybean Glyma12g36880.1 993 68.7 79.2

LJGI gnl|LJGI|TC73715 1096 100.0 100.0

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0337299.1 length: 1036 aa.

IPR000157 Toll/interleukin-1 receptor homology (TIR) domain

method AccNumber shortName E-value location

Molecular Function GO:0005515 protein binding

Biological Process GO:0007165 signal transduction

HMMPfam PF01582 TIR 3.4e-35 21-152

HMMSmart SM00255 Toll 6.4e-47 18-158

ProfileScan PS50104 TIR 29.754 17-158

superfamily SSF52200 Toll/Interleukin 1.1e-44 7-161

IPR000767 Disease resistance protein

Biological Process GO:0006952 defense response

FPrintScan PR00364 DISEASERSIST 3.7e-24 218-233
295-309
388-402
694-710

IPR002182 NB-ARC

Molecular Function GO:0043531 ADP binding

HMMPfam PF00931 NB-ARC 1.1e-40 208-460

IPR027417 P-loop containing nucleoside triphosphate hydrolase

superfamily SSF52540 P-loop 4.3e-30 179-425

no_ID

Gene3D G3DSA:3.40.50.10140 no description 2.7e-23 16-152

Gene3D G3DSA:3.40.50.300 no description 3.3e-10 215-358

Gene3D G3DSA:3.80.10.10 no description 2.1e-24 543-773

HMMPanther PTHR11017 LEUCINE-RICH 1.8e-223 8-767

HMMPanther PTHR11017:SF130DISEASE RESISTANCE 1.8e-223 8-767

Seg seg seg NA 296-315
789-804
1003-1026

superfamily SSF46785 "Winged 3.4e-24 423-530

superfamily SSF52058 L 3.7e-32 525-773

Wolf-PSORT

Lj0g3v0337299.1 chlo 6, nucl 4, mito 4

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0337299.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7LWN7_SOYBN	1185	62.8	74.9	(tr\|K7LWN7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT5G17680.1	486	37.3	57.5	\| Symbols: \| disease resistance protein (TIR-NBS-LRR class), putative \| chr5:5822999-5827153 FORWARD LENGTH=1294
Medicago	Medtr2g040230.1	1056	57.0	70.5	\| disease resistance protein (TIR-NBS-LRR class), putative \| LC \| chr2:17650494-17654963 \| 20130731
Soybean	Glyma12g36880.1	993	68.7	79.2
LJGI	gnl\|LJGI\|TC73715	1096	100.0	100.0

IPR000157	Toll/interleukin-1 receptor homology (TIR) domain
Lj0g3v0337299.1				length: 1036 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0005515	protein binding
Biological Process	GO:0007165	signal transduction
HMMPfam	PF01582	TIR	3.4e-35	21-152
HMMSmart	SM00255	Toll	6.4e-47	18-158
ProfileScan	PS50104	TIR	29.754	17-158
superfamily	SSF52200	Toll/Interleukin	1.1e-44	7-161
IPR000767	Disease resistance protein
Biological Process	GO:0006952	defense response
FPrintScan	PR00364	DISEASERSIST	3.7e-24	218-233 295-309 388-402 694-710
IPR002182	NB-ARC
Molecular Function	GO:0043531	ADP binding
HMMPfam	PF00931	NB-ARC	1.1e-40	208-460
IPR027417	P-loop containing nucleoside triphosphate hydrolase
superfamily	SSF52540	P-loop	4.3e-30	179-425
no_ID
Gene3D	G3DSA:3.40.50.10140	no description	2.7e-23	16-152
Gene3D	G3DSA:3.40.50.300	no description	3.3e-10	215-358
Gene3D	G3DSA:3.80.10.10	no description	2.1e-24	543-773
HMMPanther	PTHR11017	LEUCINE-RICH	1.8e-223	8-767
HMMPanther	PTHR11017:SF130DISEASE	RESISTANCE	1.8e-223	8-767
Seg	seg	seg	NA	296-315 789-804 1003-1026
superfamily	SSF46785	"Winged	3.4e-24	423-530
superfamily	SSF52058	L	3.7e-32	525-773