Miyakogusa Predicted Gene
- Lj0g3v0336729.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7I997_MEDTR |
101 |
94.2 |
96.2 |
(tr|G7I997) Transcription factor BEE OS=Medicago truncatula GN=MTR_1g059270 PE=4 SV=1 |
| TAIR_pep |
AT3G57800.2 |
90.1 |
80.8 |
90.4 |
| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr3:21408034-21411321 REVERSE LENGTH=379 |
| Medicago |
Medtr1g059270.2 |
102 |
94.2 |
96.2 |
| transcription factor | HC | chr1:21508218-21513937 | 20130731 |
| Soybean |
Glyma10g12210.1 |
96.3 |
90.4 |
96.2 |
|
| LJGI |
gnl|LJGI|TC62805 |
111 |
87.1 |
87.1 |
similar to UniRef100_A2Q3E9 Cluster: Helix-loop-helix DNA-binding; n=1; Medicago truncatula|Rep: Helix-loop-helix DNA-binding - Medicago truncatula (Barrel medic), partial (61%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0336729.1 |
length: 52 aa. |
| IPR011598 |
Myc-type, basic helix-loop-helix (bHLH) domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0046983 |
protein dimerization activity |
|
|
| Gene3D |
G3DSA:4.10.280.10 |
no description |
2.2e-05 |
2-45 |
| no_ID |
|
| HMMPanther |
PTHR12565 |
STEROL |
1.9e-16 |
1-52 |
| HMMPanther |
PTHR12565:SF7 |
BASIC |
1.9e-16 |
1-52 |
- Wolf-PSORT
Lj0g3v0336729.1 cyto 6, nucl 4, chlo 2, extr 2, cysk_nucl 2, nucl_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0336729.1 |
|