Miyakogusa Predicted Gene

Lj0g3v0336579.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L454_SOYBN 572 85.7 93.5 (tr|I1L454) Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=2
TAIR_pep AT1G48550.1 482 72.8 87.0 | Symbols: | Vacuolar protein sorting-associated protein 26 | chr1:17950792-17952645 REVERSE LENGTH=327
Medicago Medtr6g069620.1 572 88.6 95.2 | down syndrome critical region protein, putative | HC | chr6:25099308-25104885 | 20130731
Soybean Glyma09g30660.1 578 87.3 95.3  
LJGI gnl|LJGI|TC75622 1885 100.0 100.0 similar to UniRef100_A7PH85 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0336579.2 length: 316 aa.
IPR005377 Vacuolar protein sorting-associated protein 26
method AccNumber shortName E-value location
Biological Process GO:0007034 vacuolar transport    
Cellular Component GO:0030904 retromer complex    
HMMPfam PF03643 Vps26 1.3e-32 9-281
no_ID  
HMMPanther PTHR12233 VACUOLAR 1.4e-111 1-314
HMMPanther PTHR12233:SF2 DOWN 1.4e-111 1-314
Putative transmembrane regions
  From To
TM segments
SOSUI
Wolf-PSORT
Lj0g3v0336579.2	nucl 7, plas 3.5, cysk_nucl 3.5, golg_plas 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0336579.2