Miyakogusa Predicted Gene
- Lj0g3v0336279.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T7J6_LOTJA |
198 |
94.8 |
97.9 |
(tr|I3T7J6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G77920.1 |
124 |
58.8 |
76.3 |
| Symbols: | bZIP transcription factor family protein | chr1:29298959-29300607 FORWARD LENGTH=368 |
| Medicago |
Medtr5g060950.1 |
154 |
73.2 |
87.6 |
| BZIP family transcription factor | HC | chr5:25357130-25354838 | 20130731 |
| Soybean |
Glyma14g33800.4 |
155 |
76.6 |
89.4 |
|
| LJGI |
gnl|LJGI|TC61428 |
551 |
100.0 |
100.0 |
weakly similar to UniRef100_A7NV45 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (77%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0336279.1 |
length: 184 aa. |
| IPR025422 |
DOG1 domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF14144 |
DOG1 |
3.4e-27 |
33-106 |
| no_ID |
|
| HMMPanther |
PTHR31372 |
FAMILY |
1.8e-28 |
14-106 |
| HMMPanther |
PTHR31372:SF0 |
SUBFAMILY |
1.8e-28 |
14-106 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
1 |
23 |
| 98 |
120 |
| 122 |
143 |
- Wolf-PSORT
Lj0g3v0336279.1 chlo 4, nucl 2.5, chlo_mito 2.5, cyto 2, extr 2, cysk_nucl 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0336279.1 |
|