Miyakogusa Predicted Gene
- Lj0g3v0335169.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1L3P5_SOYBN |
486 |
95.9 |
98.0 |
(tr|I1L3P5) Eukaryotic translation initiation factor 6 OS=Glycine max GN=EIF6 PE=3 SV=1 |
| TAIR_pep |
AT3G55620.1 |
476 |
91.8 |
98.4 |
| Symbols: emb1624 | Translation initiation factor IF6 | chr3:20634581-20636312 FORWARD LENGTH=245 |
| Medicago |
Medtr6g065670.1 |
468 |
91.0 |
96.7 |
| eukaryotic translation initiation factor 6-like protein | HC | chr6:24343763-24348198 | 20130731 |
| Soybean |
Glyma09g28640.1 |
486 |
95.9 |
98.0 |
|
| LJGI |
gnl|LJGI|TC58082 |
1463 |
100.0 |
100.0 |
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0335169.1 |
length: 245 aa. |
| IPR002769 |
Translation initiation factor IF6 |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0042256 |
mature ribosome assembly |
|
|
| Molecular Function |
GO:0043022 |
ribosome binding |
|
|
| HAMAP |
MF_00032 |
eIF_6 |
140.037 |
1-245 |
| HMMPIR |
PIRSF006413 |
Translation |
5.7e-147 |
1-227 |
| HMMPanther |
PTHR10784 |
EUKARYOTIC |
1.8e-185 |
2-245 |
| HMMPfam |
PF01912 |
eIF-6 |
8e-85 |
4-204 |
| HMMSmart |
SM00654 |
translation |
7.7e-137 |
3-204 |
| HMMTigr |
TIGR00323 |
eIF-6: |
9.5e-83 |
4-224 |
| no_ID |
|
| Gene3D |
G3DSA:3.75.10.10 |
no description |
1.1e-115 |
1-224 |
| HMMPanther |
PTHR10784:SF0 |
EUKARYOTIC |
1.8e-185 |
2-245 |
| superfamily |
SSF55909 |
Pentein |
5.1e-93 |
1-224 |
- Wolf-PSORT
Lj0g3v0335169.1 cyto 5, chlo 3, cyto_nucl 3, mito 2, plas 2, mito_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0335169.1 |
|