Miyakogusa Predicted Gene
- Lj0g3v0335059.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S6K8_LOTJA |
103 |
79.1 |
79.1 |
(tr|I3S6K8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G55940.1 |
78.2 |
56.7 |
68.7 |
| Symbols: emb2731 | Uncharacterised protein family (UPF0172) | chr5:22656256-22657894 REVERSE LENGTH=208 |
| Medicago |
Medtr5g096260.1 |
91.3 |
68.7 |
74.6 |
| ER membrane protein complex subunit-like protein | HC | chr5:42088289-42085304 | 20130731 |
| Soybean |
Glyma14g01600.1 |
92.8 |
70.1 |
74.6 |
|
| LJGI |
gnl|LJGI|TC61180 |
410 |
100.0 |
100.0 |
similar to UniRef100_A7Q9C3 Cluster: Chromosome chr19 scaffold_66, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_66, whole genome shotgun sequence - Vitis vinifera (Grape), partial (98%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0335059.1 |
length: 67 aa. |
| IPR005366 |
Uncharacterised protein family UPF0172 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR12941 |
FAMILY |
6.3e-38 |
1-67 |
| HMMPfam |
PF03665 |
UPF0172 |
3.1e-14 |
3-67 |
| no_ID |
|
| HMMPanther |
PTHR12941:SF3 |
GB |
6.3e-38 |
1-67 |
| Seg |
seg |
seg |
NA |
48-61 |
- Wolf-PSORT
Lj0g3v0335059.1 nucl 6, nucl_plas 4.5, cyto 3, extr 2, chlo 1, plas 1, vacu 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0335059.1 |
|