Miyakogusa Predicted Gene
- Lj0g3v0334929.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MF12_SOYBN |
99.4 |
71.4 |
80.0 |
(tr|I1MF12) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G05475.1 |
80.5 |
54.7 |
68.0 |
| Symbols: | RNI-like superfamily protein | chr4:2765962-2767957 REVERSE LENGTH=309 |
| Medicago |
Medtr2g019060.1 |
92.8 |
64.2 |
77.6 |
| F-box/LRR protein, putative | LC | chr2:6133876-6132345 | 20130731 |
| Soybean |
Glyma15g09890.1 |
99.4 |
71.4 |
80.0 |
|
| LJGI |
gnl|LJGI|TC80874 |
192 |
88.3 |
88.3 |
weakly similar to UniRef100_O82023 Cluster: N7 protein; n=1; Medicago truncatula|Rep: N7 protein - Medicago truncatula (Barrel medic), partial (34%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0334929.1 |
length: 65 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.80.10.10 |
no description |
3.4e-06 |
4-65 |
| HMMPanther |
PTHR23125 |
F-BOX/LEUCINE |
5.4e-21 |
1-65 |
| HMMPanther |
PTHR23125:SF23 |
N7-RELATED |
5.4e-21 |
1-65 |
- Wolf-PSORT
Lj0g3v0334929.1 cyto 8, nucl 2, mito 2, plas 1, extr 1, chlo_mito 1, cyto_mito 1, cysk_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0334929.1 |
Not targeted |
-19.612 |
-2.528 |
-1.705 |
12.44% |
-15.379
|