Miyakogusa Predicted Gene

Lj0g3v0334709.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LKB2_SOYBN 1005 78.0 85.3 (tr|K7LKB2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G57430.1 361 34.6 56.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:21255731-21258403 REVERSE LENGTH=890
Medicago Medtr1g073160.1 991 75.8 85.1 | PPR containing plant-like protein | HC | chr1:32444344-32441927 | 20130731
Soybean Glyma10g33460.1 810 78.7 85.5  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0334709.1 length: 630 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.026 92-118
167-195
279-305
379-401
HMMPfam PF13041 PPR_2 2.7e-08 305-352
408-456
HMMTigr TIGR00756 PPR: 1.7e-07 91-119
167-194
307-341
410-443
ProfileScan PS51375 PPR 7.706 89-119
58-88
163-197
234-269
305-340
274-304
376-406
408-442
443-478
479-509
545-579
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1e-05 486-558
no_ID  
HMMPanther PTHR24015 FAMILY 1.1e-194 43-619
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 1.1e-194 43-619
Seg seg seg NA 156-166
Wolf-PSORT
Lj0g3v0334709.1	chlo 4, mito 3, nucl 2, plas 2, nucl_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0334709.1