Miyakogusa Predicted Gene

Lj0g3v0334259.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SQW0_LOTJA 464 99.6 99.6 (tr|I3SQW0) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G14410.1 329 69.4 83.6 | Symbols: ATWHY1, PTAC1, WHY1 | ssDNA-binding transcriptional regulator | chr1:4929352-4930810 REVERSE LENGTH=263
Medicago Medtr8g468570.1 323 72.1 81.2 | whirly transcription factor | HC | chr8:24858986-24854938 | 20130731
Soybean Glyma08g40850.1 376 82.5 91.7  
LJGI gnl|LJGI|TC62927 1538 99.9 99.9 similar to UniRef100_Q9LL85 Cluster: DNA-binding protein p24; n=1; Solanum tuberosum|Rep: DNA-binding protein p24 - Solanum tuberosum (Potato), partial (69%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0334259.1 length: 260 aa.
IPR009044 ssDNA-binding transcriptional regulator
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Gene3D G3DSA:2.30.31.10 no description 3.1e-75 73-243
superfamily SSF54447 ssDNA-binding 6.7e-74 76-260
IPR013742 Plant transcription factor
HMMPfam PF08536 Whirly 6.1e-62 84-222
no_ID  
HMMPanther PTHR31745 FAMILY 5.8e-102 47-260
Seg seg seg NA 2-34
Putative transmembrane regions
  From To
TM segments
SOSUI		 209 231
Wolf-PSORT
Lj0g3v0334259.1	chlo 11.5, chlo_mito 6.5, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0334259.1 Not targeted -60.808 0 -7.498 89.50% -53.310