Miyakogusa Predicted Gene
- Lj0g3v0333829.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1JHM8_SOYBN |
248 |
73.4 |
78.6 |
(tr|I1JHM8) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G58300.2 |
174 |
64.8 |
80.5 |
| Symbols: | Leucine-rich repeat protein kinase family protein | chr5:23572821-23574871 FORWARD LENGTH=654 |
| Medicago |
Medtr5g075630.1 |
243 |
71.1 |
80.3 |
| receptor-like kinase | HC | chr5:32173885-32169815 | 20130731 |
| Soybean |
Glyma02g40340.1 |
248 |
73.4 |
78.6 |
|
| LJGI |
gnl|LJGI|TC60079 |
1025 |
100.0 |
100.0 |
similar to UniRef100_Q8SAS9 Cluster: Candidate plant disease resistance protein; n=1; Glycine max|Rep: Candidate plant disease resistance protein - Glycine max (Soybean), partial (62%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0333829.1 |
length: 173 aa. |
| IPR013210 |
Leucine-rich repeat-containing N-terminal, type 2 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF08263 |
LRRNT_2 |
4.5e-06 |
48-85 |
| no_ID |
|
| Gene3D |
G3DSA:3.80.10.10 |
no description |
1.1e-19 |
49-173 |
| HMMPanther |
PTHR24420 |
FAMILY |
2.3e-37 |
1-173 |
| HMMPanther |
PTHR24420:SF350SUBFAMILY |
NOT |
2.3e-37 |
1-173 |
| HMMPfam |
PF13855 |
LRR_8 |
1.9e-08 |
104-150 |
| Seg |
seg |
seg |
NA |
27-45 |
| superfamily |
SSF52058 |
L |
5.4e-19 |
44-173 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
1 |
21 |
| 27 |
49 |
- Wolf-PSORT
Lj0g3v0333829.1 chlo 6, vacu 3, E.R. 2, cyto 1, mito 1, plas 1, mito_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0333829.1 |
|