Miyakogusa Predicted Gene

Lj0g3v0333209.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JYU6_SOYBN 324 91.2 92.4 (tr|I1JYU6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G53180.1 306 86.5 89.5 | Symbols: ATPTB2, PTB2 | polypyrimidine tract-binding protein 2 | chr5:21568393-21571537 REVERSE LENGTH=429
Medicago Medtr3g090960.1 311 87.7 90.6 | polypyrimidine tract-binding-like protein | HC | chr3:41318727-41325407 | 20130731
Soybean Glyma04g41660.1 324 91.2 92.4  
LJGI gnl|LJGI|TC58794 1017 100.0 100.0 similar to UniRef100_A7QTW3 Cluster: Chromosome undetermined scaffold_171, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome undetermined scaffold_171, whole genome shotgun sequence - Vitis vinifera (Grape), partial (87%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0333209.1 length: 171 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMSmart SM00360 RNA 1.9e-09 19-92
ProfileScan PS50102 RRM 11.946 18-96
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 1.4e-08 7-102
123-171
no_ID  
HMMPanther PTHR11546 HETEROGENEOUS 5.4e-81 1-171
HMMPanther PTHR11546:SF12 PUTATIVE 5.4e-81 1-171
HMMPfam PF13893 RRM_5 1.2e-05 130-171
HMMPfam PF14259 RRM_6 1.2e-09 20-89
Seg seg seg NA 68-79
superfamily SSF54928 RNA-binding 1.1e-06 10-101
105-171
Wolf-PSORT
Lj0g3v0333209.1	chlo 12, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0333209.1