Miyakogusa Predicted Gene

Lj0g3v0333099.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T6H9_LOTJA 272 87.0 87.0 (tr|I3T6H9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G11020.1 201 66.1 72.0 | Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr1:3676968-3678350 FORWARD LENGTH=321
Medicago Medtr4g113520.1 256 79.9 82.4 | zinc finger protein | HC | chr4:46675210-46679677 | 20130731
Soybean Glyma05g08220.2 250 80.8 84.0  
LJGI gnl|LJGI|TC79183 916 100.0 100.0 similar to UniRef100_Q6YW60 Cluster: Zinc finger (C3HC4-type RING finger) protein-like; n=1; Oryza sativa Japonica Group|Rep: Zinc finger (C3HC4-type RING finger) protein-like - Oryza sativa subsp. japonica (Rice), partial (82%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0333099.1 length: 154 aa.
IPR011016 Zinc finger, RING-CH-type
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF12906 RINGv 1.6e-12 52-102
HMMSmart SM00744 The 2.7e-18 51-103
ProfileScan PS51292 ZF_RING_CH 22.018 44-109
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 4.6e-17 49-108
no_ID  
HMMPanther PTHR23012 MEMBRANE 2.6e-88 1-154
HMMPanther PTHR23012:SF28 ZINC 2.6e-88 1-154
Seg seg seg NA 16-35
superfamily SSF57850 RING/U-box 5.7e-14 44-109
Putative transmembrane regions
  From To
TM segments
SOSUI		 125 147
Wolf-PSORT
Lj0g3v0333099.1	nucl 4, golg 3, chlo 2, cysk_nucl 2, golg_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0333099.1 Not targeted -74.208 -4.562 -16.469 97.55% -53.177