Miyakogusa Predicted Gene

Lj0g3v0333039.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KWQ5_SOYBN 367 71.7 77.9 (tr|I1KWQ5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G01410.1 283 59.6 70.6 | Symbols: | NHL domain-containing protein | chr2:175209-176372 REVERSE LENGTH=387
Medicago Medtr7g020840.1 367 71.0 79.9 | NHL domain protein | HC | chr7:6500793-6502288 | 20130731
Soybean Glyma08g28790.1 367 71.7 77.9  
LJGI gnl|LJGI|FS338735 640 100.0 100.0 weakly similar to UniRef100_A7P3K5 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (40%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0333039.2 length: 281 aa.
IPR011042 Six-bladed beta-propeller, TolB-like
method AccNumber shortName E-value location
Gene3D G3DSA:2.120.10.30 no description 6.6e-16 39-238
no_ID  
HMMPanther PTHR31460 FAMILY 4.2e-17 96-210
Seg seg seg NA 6-15
269-278
superfamily SSF101898 NHL 9.5e-17 25-261
Putative transmembrane regions
  From To
TM segments
SOSUI		 5 27
Wolf-PSORT
Lj0g3v0333039.2	chlo 12, nucl 1, extr 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0333039.2