Miyakogusa Predicted Gene
- Lj0g3v0332909.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MQT1_SOYBN |
761 |
88.1 |
96.0 |
(tr|K7MQT1) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G20440.2 |
634 |
73.7 |
86.6 |
| Symbols: EMB2729, BE1 | Alpha amylase family protein | chr3:7123603-7130364 REVERSE LENGTH=899 |
| Medicago |
Medtr3g053220.1 |
724 |
85.0 |
92.3 |
| 1,4-alpha-glucan-branching enzyme/amyloplastic protein | HC | chr3:21141021-21130771 | 20130731 |
| Soybean |
Glyma19g37750.2 |
305 |
40.7 |
59.5 |
|
| LJGI |
gnl|LJGI|AV778788 |
170 |
91.9 |
91.9 |
similar to UniRef100_A7P0L5 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (4%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0332909.1 |
length: 403 aa. |
| IPR006048 |
Alpha-amylase, C-terminal all beta |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| Molecular Function |
GO:0043169 |
cation binding |
|
|
| HMMPfam |
PF02806 |
Alpha-amylase_C |
4.4e-19 |
304-398 |
| IPR013780 |
Glycosyl hydrolase, family 13, all-beta |
| Gene3D |
G3DSA:2.60.40.1180 |
no description |
2.8e-19 |
298-397 |
| IPR013781 |
Glycoside hydrolase, catalytic domain |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| Gene3D |
G3DSA:3.20.20.80 |
no description |
2.6e-26 |
7-289 |
| IPR015902 |
Glycoside hydrolase, family 13 |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| HMMPanther |
PTHR10357 |
ALPHA-AMYLASE |
1e-184 |
1-397 |
| IPR017853 |
Glycoside hydrolase, superfamily |
| superfamily |
SSF51445 |
(Trans)glycosidases |
2.1e-34 |
3-299 |
| no_ID |
|
| HMMPanther |
PTHR10357:SF27 |
1,4-ALPHA-GLUCAN-BRANCHING |
1e-184 |
1-397 |
| superfamily |
SSF51011 |
Glycosyl |
2.5e-26 |
297-400 |
- Wolf-PSORT
Lj0g3v0332909.1 cyto 7, mito 2, pero 2, nucl 1, extr 1, cysk 1, chlo_mito 1, cyto_mito 1, cysk_nucl 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0332909.1 |
|