Miyakogusa Predicted Gene

Lj0g3v0332629.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MEF2_SOYBN 721 68.8 74.9 (tr|I1MEF2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G21660.1 642 64.3 75.0 | Symbols: | proline-rich spliceosome-associated (PSP) family protein | chr4:11506259-11509772 REVERSE LENGTH=584
Medicago Medtr4g089085.1 705 67.1 73.7 | splicing factor 3B subunit 2 | HC | chr4:35697993-35706063 | 20130731
Soybean Glyma15g07760.1 721 68.8 74.9  
LJGI gnl|LJGI|TC74478 733 93.6 93.6 similar to UniRef100_A2Q200 Cluster: PSP, proline-rich; n=1; Medicago truncatula|Rep: PSP, proline-rich - Medicago truncatula (Barrel medic), partial (42%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0332629.1 length: 559 aa.
IPR006568 PSP, proline-rich
method AccNumber shortName E-value location
HMMPfam PF04046 PSP 8.1e-21 277-324
HMMSmart SM00581 proline-rich 9.4e-24 273-326
IPR007180 Domain of unknown function DUF382
Cellular Component GO:0005634 nucleus    
HMMPfam PF04037 DUF382 3e-58 142-269
no_ID  
Coil coil coiled-coil NA 118-139
375-408
HMMPanther PTHR12785 FAMILY 7.1e-235 19-559
HMMPanther PTHR12785:SF6 SUBFAMILY 7.1e-235 19-559
Seg seg seg NA 95-110
113-127
379-405
537-556
Wolf-PSORT
Lj0g3v0332629.1	nucl 6, cyto 5, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0332629.1