| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1K037_SOYBN | 618 | 86.8 | 92.9 | (tr|I1K037) Histone deacetylase OS=Glycine max PE=3 SV=1 |
| TAIR_pep | AT5G63110.1 | 567 | 80.9 | 91.4 | | Symbols: HDA6, AXE1, ATHDA6, RTS1, RPD3B, SIL1 | histone deacetylase 6 | chr5:25315834-25318227 REVERSE LENGTH=471 |
| Medicago | Medtr3g077160.1 | 586 | 84.7 | 93.3 | | histone deacetylase family protein | HC | chr3:34636818-34643051 | 20130731 |
| Soybean | Glyma05g02540.1 | 618 | 86.8 | 92.9 | |
| LJGI | gnl|LJGI|TC59998 | 1124 | 95.2 | 95.2 | homologue to UniRef100_A7PCT8 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (64%) |
| Lj0g3v0332349.1 | length: 355 aa. | |||
| IPR000286 | Histone deacetylase superfamily | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| FPrintScan | PR01270 | HDASUPER | 5.2e-24 | 154-177 186-201 271-281 |
| HMMPanther | PTHR10625 | HISTONE | 3.5e-222 | 23-332 |
| IPR003084 | Histone deacetylase | |||
| Molecular Function | GO:0004407 | histone deacetylase activity | ||
| Biological Process | GO:0016575 | histone deacetylation | ||
| FPrintScan | PR01271 | HISDACETLASE | 4.9e-60 | 45-62 78-96 111-128 132-152 173-189 232-245 249-267 |
| HMMPIR | PIRSF037913 | Histone | 6.5e-216 | 22-355 |
| IPR023801 | Histone deacetylase domain | |||
| Gene3D | G3DSA:3.40.800.20 | no description | 9.1e-113 | 21-335 |
| HMMPfam | PF00850 | Hist_deacetyl | 1.2e-87 | 40-334 |
| no_ID | ||||
| HMMPanther | PTHR10625:SF28 | HISTONE | 3.5e-222 | 23-332 |
| superfamily | SSF52768 | Arginase/deacetylase | 6.1e-118 | 24-337 |
| From | To | |
|---|---|---|
| TM segments SOSUI |
331 | 353 |
Lj0g3v0332349.1 cyto 9, nucl 2, E.R. 2
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0332349.1 |