Miyakogusa Predicted Gene
- Lj0g3v0332299.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7KN56_MEDTR |
162 |
75.5 |
83.3 |
(tr|G7KN56) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_6g021740 PE=4 SV=1 |
| TAIR_pep |
AT4G35850.1 |
153 |
71.0 |
83.0 |
| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr4:16983638-16986681 FORWARD LENGTH=444 |
| Medicago |
Medtr6g021740.1 |
162 |
75.5 |
83.3 |
| PPR containing plant-like protein | HC | chr6:7478019-7487121 | 20130731 |
| Soybean |
Glyma05g24150.1 |
158 |
74.0 |
83.0 |
|
| LJGI |
gnl|LJGI|GO011449 |
595 |
98.8 |
98.8 |
weakly similar to UniRef100_A7PLZ7 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (45%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0332299.1 |
length: 106 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR24015 |
FAMILY |
2.1e-29 |
1-102 |
| HMMPanther |
PTHR24015:SF108OS02G0126500 |
PROTEIN |
2.1e-29 |
1-102 |
- Wolf-PSORT
Lj0g3v0332299.1 chlo 3, cyto 3, mito 3, chlo_mito 3, nucl 2, mito_plas 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0332299.1 |
|