Miyakogusa Predicted Gene

Lj0g3v0332239.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JA63_MEDTR 631 87.6 95.0 (tr|G7JA63) TBC1 domain family member OS=Medicago truncatula GN=MTR_3g083840 PE=4 SV=1
TAIR_pep AT4G13730.1 558 76.5 89.3 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily protein | chr4:7970299-7974055 FORWARD LENGTH=449
Medicago Medtr3g083840.1 631 87.6 95.0 | RabGAP/TBC domain protein | HC | chr3:37824348-37830080 | 20130731
Soybean Glyma11g36520.1 594 84.6 90.7  
LJGI gnl|LJGI|TC69361 916 99.8 99.8 homologue to UniRef100_A7QHM3 Cluster: Chromosome chr5 scaffold_98, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_98, whole genome shotgun sequence - Vitis vinifera (Grape), partial (35%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0332239.3 length: 338 aa.
IPR000195 Rab-GTPase-TBC domain
method AccNumber shortName E-value location
Molecular Function GO:0005097 Rab GTPase activator activity    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0032313 regulation of Rab GTPase activity    
HMMPfam PF00566 RabGAP-TBC 4.6e-45 110-303
HMMSmart SM00164 Domain 2.8e-52 8-307
ProfileScan PS50086 TBC_RABGAP 33.052 13-281
superfamily SSF47923 Ypt/Rab-GAP 2.5e-33 1-240
215-336
no_ID  
Gene3D G3DSA:1.10.8.270 no description 5.3e-27 101-201
HMMPanther PTHR22957 TBC1 8.1e-180 1-336
HMMPanther PTHR22957:SF27 TBC1 8.1e-180 1-336
Wolf-PSORT
Lj0g3v0332239.3	nucl 6, cyto 5, chlo 1, mito 1, pero 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0332239.3