Miyakogusa Predicted Gene

Lj0g3v0332239.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JA63_MEDTR 146 53.6 62.9 (tr|G7JA63) TBC1 domain family member OS=Medicago truncatula GN=MTR_3g083840 PE=4 SV=1
TAIR_pep AT4G13730.2 115 73.6 91.7 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily protein | chr4:7970299-7973901 FORWARD LENGTH=408
Medicago Medtr3g083840.1 146 53.6 62.9 | RabGAP/TBC domain protein | HC | chr3:37824348-37830080 | 20130731
Soybean Glyma05g28660.1 123 76.7 87.7  
LJGI gnl|LJGI|FS336750 547 100.0 100.0 similar to UniRef100_A7QHM3 Cluster: Chromosome chr5 scaffold_98, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_98, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0332239.1 length: 148 aa.
IPR000195 Rab-GTPase-TBC domain
method AccNumber shortName E-value location
Molecular Function GO:0005097 Rab GTPase activator activity    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0032313 regulation of Rab GTPase activity    
superfamily SSF47923 Ypt/Rab-GAP 1e-08 67-145
no_ID  
HMMPanther PTHR22957 TBC1 2.6e-30 4-146
HMMPanther PTHR22957:SF27 TBC1 2.6e-30 4-146
Seg seg seg NA 25-39
51-70
Wolf-PSORT
Lj0g3v0332239.1	nucl 10, nucl_plas 6.33333, cyto_nucl 5.83333, plas 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0332239.1