Miyakogusa Predicted Gene

Lj0g3v0332229.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G8A123_MEDTR 1077 82.4 90.7 (tr|G8A123) Protein transport protein SEC23 OS=Medicago truncatula GN=MTR_115s0021 PE=4 SV=1
TAIR_pep AT5G43670.1 831 62.6 79.2 | Symbols: | Sec23/Sec24 protein transport family protein | chr5:17539025-17541733 REVERSE LENGTH=794
Medicago Medtr1g105605.1 1077 82.4 90.7 | protein transporter Sec23-like protein | HC | chr1:47599557-47596521 | 20130731
Soybean Glyma18g00420.1 919 75.8 85.3  
LJGI gnl|LJGI|GO006809 1370 99.6 99.6 similar to UniRef100_A7NX00 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (32%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0332229.2 length: 719 aa.
IPR002035 von Willebrand factor, type A
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:3.40.50.410 no description 3.4e-82 96-361
IPR006896 Sec23/Sec24, trunk domain
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0006888 ER to Golgi vesicle-mediated transport    
Cellular Component GO:0030127 COPII vesicle coat    
HMMPfam PF04811 Sec23_trunk 1.7e-54 96-355
IPR006900 Sec23/Sec24, helical domain
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0006888 ER to Golgi vesicle-mediated transport    
Cellular Component GO:0030127 COPII vesicle coat    
HMMPfam PF04815 Sec23_helical 2.7e-29 478-578
superfamily SSF81811 Helical 3.8e-44 477-579
IPR007123 Gelsolin domain
HMMPfam PF00626 Gelsolin 9.2e-06 591-677
IPR012990 Sec23/Sec24 beta-sandwich
HMMPfam PF08033 Sec23_BS 2.9e-22 365-465
no_ID  
Gene3D G3DSA:2.60.40.1670 no description 6.4e-37 362-465
Gene3D G3DSA:3.40.20.10 no description 1.2e-46 579-696
HMMPanther PTHR11141 PROTEIN 8.3e-289 61-719
Seg seg seg NA 56-74
112-131
superfamily SSF53300 vWA-like 6.3e-69 97-355
superfamily SSF81995 beta-sandwich 2.5e-31 372-476
superfamily SSF82754 C-terminal, 4.2e-49 580-718
Wolf-PSORT
Lj0g3v0332229.2	nucl 10, chlo 1, cyto 1, plas 1, E.R._vacu 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0332229.2