Miyakogusa Predicted Gene

Lj0g3v0332049.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SJI6_LOTJA 236 75.3 75.3 (tr|I3SJI6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G25752.1 154 71.0 86.0 | Symbols: ATRBL11, RBL11 | rhomboid-like protein 11 | chr5:8951503-8953323 REVERSE LENGTH=280
Medicago Medtr1g008300.1 155 73.7 85.9 | rhomboid protease YdcA-like protein, putative | HC | chr1:846306-849646 | 20130731
Soybean Glyma17g25950.1 164 80.0 86.3  
LJGI gnl|LJGI|TC73987 698 100.0 100.0 similar to UniRef100_A7P5B9 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (66%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0332049.1 length: 188 aa.
IPR022764 Peptidase S54, rhomboid domain
method AccNumber shortName E-value location
Molecular Function GO:0004252 serine-type endopeptidase activity    
Cellular Component GO:0016021 integral to membrane    
Gene3D G3DSA:1.20.1540.10 no description 3.7e-08 95-158
HMMPfam PF01694 Rhomboid 3e-06 126-158
no_ID  
Seg seg seg NA 20-41
46-60
superfamily SSF144091 Rhomboid-like 1.5e-10 86-158
Putative transmembrane regions
  From To
TM segments
SOSUI		 92 114
153 175
Wolf-PSORT
Lj0g3v0332049.1	plas 5, chlo 3, nucl_plas 3, mito 2, E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0332049.1