Miyakogusa Predicted Gene

Lj0g3v0331549.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KK42_SOYBN 914 76.9 82.6 (tr|K7KK42) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G73930.2 786 65.4 76.0 | Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1630 (InterPro:IPR012860); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr1:27795347-27797534 REVERSE LENGTH=623
Medicago --No_Hits--        
Soybean Glyma17g13030.1 811 69.4 76.5  
LJGI gnl|LJGI|FS353431 797 100.0 100.0 similar to UniRef100_A7PGP2 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (20%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0331549.2 length: 601 aa.
IPR012860 Arf3-interacting protein 1, N-terminal domain
method AccNumber shortName E-value location
HMMPfam PF07792 Afi1 6.6e-16 27-89
IPR024224 Uncharacterised protein family FAM116
HMMPanther PTHR13677 UNCHARACTERIZED 3.3e-195 12-581
no_ID  
HMMPanther PTHR13677:SF0 SUBFAMILY 3.3e-195 12-581
HMMPfam PF08616 SPA 7.5e-07 250-335
Seg seg seg NA 82-90
250-261
280-295
377-389
532-542
Putative transmembrane regions
  From To
TM segments
SOSUI		 249 271
Wolf-PSORT
Lj0g3v0331549.2	plas 7, nucl 2, mito 1, vacu 1, E.R. 1, pero 1, cysk 1, cyto_nucl 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0331549.2