Miyakogusa Predicted Gene

Lj0g3v0331349.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL G7KJD3_MEDTR 200 69.3 79.6 (tr|G7KJD3) Chloroplastic group IIA intron splicing facilitator CRS1 OS=Medicago truncatula GN=MTR_6g008410 PE=4 SV=1
TAIR_pep AT3G01370.1 165 58.4 72.3 | Symbols: ATCFM2, CFM2 | CRM family member 2 | chr3:139033-143477 FORWARD LENGTH=1011
Medicago Medtr6g008410.1 200 69.3 79.6 | group IIA intron splicing facilitator CRS1 | HC | chr6:2256928-2245549 | 20130731
Soybean Glyma19g01700.1 145 54.0 62.8  
LJGI gnl|LJGI|AV410198 200 100.0 100.0 similar to UniRef100_P09789 Cluster: Glycine-rich cell wall structural protein 1 precursor; n=1; Petunia x hybrida|Rep: Glycine-rich cell wall structural protein 1 precursor - Petunia hybrida (Petunia), partial (10%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0331349.1 length: 202 aa.
IPR001890 RNA-binding, CRM domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Gene3D G3DSA:3.30.110.60 no description 9.6e-11 134-199
HMMPfam PF01985 CRS1_YhbY 9.3e-11 136-199
ProfileScan PS51295 CRM 13.452 133-202
superfamily SSF75471 YhbY-like 1.8e-13 133-199
no_ID  
Coil coil coiled-coil NA 101-126
HMMPanther PTHR31846 FAMILY 2.6e-35 59-199
HMMPanther PTHR31846:SF0 SUBFAMILY 2.6e-35 59-199
Seg seg seg NA 4-27
42-62
109-126
Wolf-PSORT
Lj0g3v0331349.1	chlo 9, nucl 3, mito 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0331349.1