Miyakogusa Predicted Gene

Lj0g3v0330299.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NBN0_SOYBN 707 64.7 77.2 (tr|I1NBN0) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep AT5G27870.1 280 32.9 50.5 | Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily | chr5:9878991-9881806 REVERSE LENGTH=732
Medicago Medtr7g111560.1 662 60.4 71.5 | pectinesterase/pectinesterase inhibitor | LC | chr7:45796275-45794347 | 20130731
Soybean Glyma19g41350.1 679 65.0 77.6  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0330299.1 length: 582 aa.
IPR000070 Pectinesterase, catalytic
method AccNumber shortName E-value location
Cellular Component GO:0005618 cell wall    
Molecular Function GO:0030599 pectinesterase activity    
Biological Process GO:0042545 cell wall modification    
HMMPfam PF01095 Pectinesterase 1.6e-89 255-561
IPR006501 Pectinesterase inhibitor
Molecular Function GO:0004857 enzyme inhibitor activity    
Molecular Function GO:0030599 pectinesterase activity    
Gene3D G3DSA:1.20.140.40 no description 1.1e-14 66-207
HMMPfam PF04043 PMEI 5.5e-14 67-203
HMMSmart SM00856 Plant 4.8e-09 59-203
superfamily SSF101148 Plant 1e-13 61-208
IPR011050 Pectin lyase fold/virulence factor
superfamily SSF51126 Pectin 7.3e-61 248-578
IPR012334 Pectin lyase fold
Gene3D G3DSA:2.160.20.10 no description 1.2e-76 255-576
no_ID  
HMMPanther PTHR31707 FAMILY 5.4e-126 12-580
HMMPanther PTHR31707:SF0 SUBFAMILY 5.4e-126 12-580
Seg seg seg NA 218-226
Putative transmembrane regions
  From To
TM segments
SOSUI		 28 50
Wolf-PSORT
Lj0g3v0330299.1	plas 3, chlo 2, extr 2, E.R. 2, mito_plas 2, cyto_plas 2, nucl 1.5, chlo_mito 1.5, cysk_nucl 1.5, golg_plas 1.5, E.R._vacu 1.5, cyto_E.R. 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0330299.1