Miyakogusa Predicted Gene

Lj0g3v0329999.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LXT1_SOYBN 693 69.5 79.3 (tr|K7LXT1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G38510.2 333 43.8 58.7 | Symbols: | Rhomboid-related intramembrane serine protease family protein | chr5:15417839-15420002 REVERSE LENGTH=434
Medicago Medtr0024s0260.1 565 62.5 71.5 | S54 family peptidase | HC | scaffold0024:113389-116979 | 20130731
Soybean Glyma13g07540.1 693 69.5 79.3  
LJGI gnl|LJGI|TC75129 1338 99.7 99.7 similar to UniRef100_A7PAN1 Cluster: Chromosome chr14 scaffold_9, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_9, whole genome shotgun sequence - Vitis vinifera (Grape), partial (45%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0329999.2 length: 553 aa.
IPR002610 Peptidase S54, rhomboid
method AccNumber shortName E-value location
Molecular Function GO:0004252 serine-type endopeptidase activity    
Biological Process GO:0006508 proteolysis    
Cellular Component GO:0016021 integral to membrane    
HMMPanther PTHR22936 RHOMBOID-RELATED 2e-31 315-492
IPR022764 Peptidase S54, rhomboid domain
Molecular Function GO:0004252 serine-type endopeptidase activity    
Cellular Component GO:0016021 integral to membrane    
Gene3D G3DSA:1.20.1540.10 no description 1.9e-32 315-495
HMMPfam PF01694 Rhomboid 4.4e-30 357-495
no_ID  
HMMPanther PTHR22936:SF0 SUBFAMILY 2e-31 315-492
superfamily SSF144091 Rhomboid-like 6.8e-32 305-502
Putative transmembrane regions
  From To
TM segments
SOSUI		 1 21
309 331
364 386
391 413
420 442
453 475
519 541
Wolf-PSORT
Lj0g3v0329999.2	nucl 4, plas 4, nucl_plas 4, cyto 2, cysk_nucl 2, golg_plas 2, cysk_plas 2, mito_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0329999.2