Miyakogusa Predicted Gene

Lj0g3v0329609.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MTE0_SOYBN 850 62.6 74.2 (tr|K7MTE0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G07390.3 398 37.6 53.6 | Symbols: AtRLP1, RLP1 | receptor like protein 1 | chr1:2269893-2274654 FORWARD LENGTH=1083
Medicago Medtr7g066590.1 782 59.4 71.0 | LRR receptor-like kinase | HC | chr7:24243931-24241034 | 20130731
Soybean Glyma18g50840.1 827 61.6 75.1  
LJGI gnl|LJGI|BP051648 940 97.5 97.5 similar to UniRef100_A7QDE4 Cluster: Chromosome chr10 scaffold_81, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr10 scaffold_81, whole genome shotgun sequence - Vitis vinifera (Grape), partial (3%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0329609.1 length: 692 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.08 3-25
105-127
253-274
421-437
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 13 1-29
202-226
251-274
298-322
345-367
418-442
514-537
538-562
no_ID  
FPrintScan PR00019 LEURICHRPT 5.2e-05 421-434
514-527
Gene3D G3DSA:3.80.10.10 no description 1.3e-27 2-85
86-281
282-442
493-606
HMMPanther PTHR24420 FAMILY 1.9e-127 1-664
HMMPanther PTHR24420:SF474SUBFAMILY NOT 1.9e-127 1-664
HMMPfam PF13855 LRR_8 2.1e-09 179-240
496-551
Seg seg seg NA 83-96
superfamily SSF52047 RNI-like 1.1e-28 1-223
superfamily SSF52058 L 5.7e-31 177-460
394-605
Putative transmembrane regions
  From To
TM segments
SOSUI		 636 658
Wolf-PSORT
Lj0g3v0329609.1	golg 4, chlo 2, vacu 2, E.R. 2, E.R._vacu 2, nucl 1, cyto 1, plas 1, extr 1, cyto_nucl 1, chlo_mito 1, nucl_plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0329609.1