Miyakogusa Predicted Gene

Lj0g3v0329529.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MQD4_SOYBN 826 92.9 95.7 (tr|I1MQD4) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep AT1G17840.1 744 83.8 92.3 | Symbols: WBC11, ABCG11, DSO, COF1, ATWBC11 | white-brown complex homolog protein 11 | chr1:6142870-6145894 FORWARD LENGTH=703
Medicago Medtr6g066240.1 783 90.9 93.5 | white-brown-complex ABC transporter family protein, putative | HC | chr6:24615510-24606551 | 20130731
Soybean Glyma09g28870.1 821 92.9 95.4  
LJGI gnl|LJGI|TC72107 589 100.0 100.0 similar to UniRef100_A7PAW2 Cluster: Chromosome chr16 scaffold_10, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_10, whole genome shotgun sequence - Vitis vinifera (Grape), partial (51%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0329529.1 length: 440 aa.
IPR003439 ABC transporter-like
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 3.3e-16 97-224
ProfileScan PS50893 ABC_TRANSPORTER_2 18.347 53-296
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 3.7e-12 82-253
IPR017871 ABC transporter, conserved site
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
PatternScan PS00211 ABC_TRANSPORTER_1 NA 196-210
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.5e-48 53-282
no_ID  
Gene3D G3DSA:3.40.50.300 no description 2.5e-50 53-285
HMMPanther PTHR19241 ATP-BINDING 6.6e-202 26-434
HMMPanther PTHR19241:SF20 ATP-BINDING 6.6e-202 26-434
Putative transmembrane regions
  From To
TM segments
SOSUI		 404 426
Wolf-PSORT
Lj0g3v0329529.1	golg 5, plas 3.5, E.R._plas 2.5, cyto 2, chlo 1, nucl 1, vacu 1, cyto_pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0329529.1