Miyakogusa Predicted Gene
- Lj0g3v0329479.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S460_LOTJA |
394 |
100.0 |
100.0 |
(tr|I3S460) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G56380.1 |
96.7 |
25.5 |
40.3 |
| Symbols: | F-box/RNI-like/FBD-like domains-containing protein | chr5:22838836-22840353 REVERSE LENGTH=439 |
| Medicago |
Medtr1g041245.1 |
161 |
34.2 |
51.2 |
| cyclin-like F-box protein | HC | chr1:15330666-15327969 | 20130731 |
| Soybean |
Glyma08g46320.1 |
201 |
38.2 |
56.6 |
|
| LJGI |
gnl|LJGI|TC69553 |
1790 |
98.4 |
98.4 |
weakly similar to UniRef100_Q8L7H1 Cluster: F-box/LRR-repeat protein At4g14103; n=1; Arabidopsis thaliana|Rep: F-box/LRR-repeat protein At4g14103 - Arabidopsis thaliana (Mouse-ear cress), partial (13%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0329479.1 |
length: 316 aa. |
| IPR006566 |
FBD |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF08387 |
FBD |
9.7e-11 |
268-316 |
| no_ID |
|
| Gene3D |
G3DSA:3.80.10.10 |
no description |
1.9e-09 |
207-255 |
| HMMPanther |
PTHR32212 |
FAMILY |
5e-22 |
2-162 |
| superfamily |
SSF52047 |
RNI-like |
9.9e-09 |
93-256 |
- Wolf-PSORT
Lj0g3v0329479.1 chlo 8, mito 1.5, cyto_mito 1.5, nucl 1, cyto 1, plas 1, extr 1, cyto_nucl 1, nucl_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0329479.1 |
|