Miyakogusa Predicted Gene
- Lj0g3v0329399.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7IWX0_MEDTR |
504 |
62.7 |
79.4 |
(tr|G7IWX0) Cation/H+ exchanger OS=Medicago truncatula GN=MTR_3g031160 PE=4 SV=1 |
| TAIR_pep |
AT1G06970.1 |
270 |
40.1 |
64.7 |
| Symbols: CHX14, ATCHX14 | cation/hydrogen exchanger 14 | chr1:2138109-2140818 FORWARD LENGTH=829 |
| Medicago |
Medtr3g031160.1 |
504 |
62.7 |
79.4 |
| cation/H+ exchanger 3 | LC | chr3:26934155-26931081 | 20130731 |
| Soybean |
Glyma18g06410.1 |
503 |
63.7 |
80.1 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0329399.1 |
length: 372 aa. |
| IPR006153 |
Cation/H+ exchanger |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006812 |
cation transport |
|
|
| Molecular Function |
GO:0015299 |
solute:hydrogen antiporter activity |
|
|
| Cellular Component |
GO:0016021 |
integral to membrane |
|
|
| Biological Process |
GO:0055085 |
transmembrane transport |
|
|
| HMMPfam |
PF00999 |
Na_H_Exchanger |
2e-08 |
5-161 |
| no_ID |
|
| HMMPanther |
PTHR32468 |
FAMILY |
2.6e-110 |
1-371 |
| HMMPanther |
PTHR32468:SF0 |
SUBFAMILY |
2.6e-110 |
1-371 |
| Seg |
seg |
seg |
NA |
6-18 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
10 |
32 |
| 57 |
79 |
| 85 |
107 |
| 112 |
134 |
| 144 |
166 |
- Wolf-PSORT
Lj0g3v0329399.1 plas 5, vacu 3, golg_plas 3, mito_plas 3, cyto_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0329399.1 |
|