database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | G7J3T2_MEDTR | 1514 | 87.2 | 91.6 | (tr|G7J3T2) ABC transporter D family member OS=Medicago truncatula GN=MTR_3g087350 PE=3 SV=1 |
TAIR_pep | AT4G39850.1 | 1330 | 77.0 | 85.1 | | Symbols: PXA1, PED3, CTS, ACN2, AtABCD1 | peroxisomal ABC transporter 1 | chr4:18489220-18496762 FORWARD LENGTH=1337 |
Medicago | Medtr3g087350.2 | 1515 | 87.2 | 91.6 | | peroxisomal ABC transporter | HC | chr3:39601157-39588798 | 20130731 |
Soybean | Glyma18g02110.1 | 1405 | 86.9 | 90.4 | |
LJGI | gnl|LJGI|BP042433 | 1059 | 100.0 | 100.0 | similar to UniRef100_Q8VWH7 Cluster: Peroxisomal ABC transporter; n=1; Arabidopsis thaliana|Rep: Peroxisomal ABC transporter - Arabidopsis thaliana (Mouse-ear cress), partial (13%) |
Lj0g3v0329159.3 | length: 850 aa. | |||
IPR003439 | ABC transporter-like | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
Molecular Function | GO:0005524 | ATP binding | ||
Molecular Function | GO:0016887 | ATPase activity | ||
HMMPfam | PF00005 | ABC_tran | 1.3e-09 | 487-609 |
ProfileScan | PS50893 | ABC_TRANSPORTER_2 | 13.832 | 447-676 |
IPR003593 | AAA+ ATPase domain | |||
Molecular Function | GO:0000166 | nucleotide binding | ||
Molecular Function | GO:0017111 | nucleoside-triphosphatase activity | ||
HMMSmart | SM00382 | ATPases | 5.5e-07 | 472-651 |
IPR010509 | ABC transporter, N-terminal | |||
Biological Process | GO:0006810 | transport | ||
Cellular Component | GO:0016020 | membrane | ||
HMMPfam | PF06472 | ABC_membrane_2 | 6.3e-24 | 85-359 737-850 |
IPR011527 | ABC transporter, transmembrane domain, type 1 | |||
Molecular Function | GO:0005524 | ATP binding | ||
Biological Process | GO:0006810 | transport | ||
Cellular Component | GO:0016021 | integral to membrane | ||
Molecular Function | GO:0042626 | ATPase activity, coupled to transmembrane movement of substances | ||
Biological Process | GO:0055085 | transmembrane transport | ||
superfamily | SSF90123 | ABC | 3.2e-09 | 70-355 |
IPR017871 | ABC transporter, conserved site | |||
Molecular Function | GO:0005524 | ATP binding | ||
Molecular Function | GO:0016887 | ATPase activity | ||
PatternScan | PS00211 | ABC_TRANSPORTER_1 | NA | 581-595 |
IPR017940 | ABC transporter, integral membrane type 1 | |||
ProfileScan | PS50929 | ABC_TM1F | 10.813 | 151-341 |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | |||
superfamily | SSF52540 | P-loop | 1e-40 | 447-662 |
no_ID | ||||
Coil | coil | coiled-coil | NA | 279-300 |
Gene3D | G3DSA:1.20.1560.10 | no description | 3.4e-07 | 145-417 |
Gene3D | G3DSA:3.40.50.300 | no description | 2.8e-39 | 447-684 |
HMMPanther | PTHR11384 | ATP-BINDING | 0 | 13-714 |
HMMPanther | PTHR11384:SF4 | PEROXISOMAL | 0 | 13-714 |
Seg | seg | seg | NA | 17-28 713-726 |
From | To | |
---|---|---|
TM segments SOSUI |
23 | 41 |
337 | 359 | |
377 | 399 |
Lj0g3v0329159.3 chlo 6, vacu 3, nucl 2, E.R._vacu 2
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj0g3v0329159.3 |