| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K3YSM3_SETIT | 473 | 99.2 | 99.6 | (tr|K3YSM3) Uncharacterized protein OS=Setaria italica GN=Si016746m.g PE=4 SV=1 |
| TAIR_pep | AT5G20620.1 | 471 | 99.2 | 99.6 | | Symbols: UBQ4 | ubiquitin 4 | chr5:6973315-6974463 REVERSE LENGTH=382 |
| Medicago | Medtr4g081010.3 | 471 | 99.2 | 99.6 | | polyubiquitin 3 | HC | chr4:31289098-31286525 | 20130731 |
| Soybean | Glyma13g24470.1 | 471 | 99.2 | 100.0 | |
| LJGI | gnl|LJGI|TC67537 | 706 | 88.0 | 88.0 | UniRef100_Q7EUR6 Cluster: AT4g05320/C17L7_240; n=8; core eudicotyledons|Rep: AT4g05320/C17L7_240 - Arabidopsis thaliana (Mouse-ear cress), partial (80%) |
| Lj0g3v0328939.1 | length: 239 aa. | |||
| IPR000626 | Ubiquitin | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0005515 | protein binding | ||
| HMMPfam | PF00240 | ubiquitin | 5.5e-34 | 6-74 82-150 158-226 |
| HMMSmart | SM00213 | Ubiquitin | 3e-35 | 1-72 77-148 153-224 |
| IPR019954 | Ubiquitin conserved site | |||
| PatternScan | PS00299 | UBIQUITIN_1 | NA | 27-52 103-128 179-204 |
| IPR019955 | Ubiquitin supergroup | |||
| ProfileScan | PS50053 | UBIQUITIN_2 | 30.452 | 1-76 77-152 153-228 |
| IPR019956 | Ubiquitin subgroup | |||
| FPrintScan | PR00348 | UBIQUITIN | 1.4e-38 | 163-183 184-204 205-226 |
| no_ID | ||||
| Gene3D | G3DSA:3.10.20.90 | no description | 2.3e-50 | 1-77 78-154 155-234 |
| HMMPanther | PTHR10666 | UBIQUITIN | 5.7e-226 | 1-239 |
| superfamily | SSF54236 | Ubiquitin-like | 1.9e-34 | 153-232 1-76 77-152 |
Lj0g3v0328939.1 cyto 7, cyto_nucl 6.5, chlo 3, mito 1, pero 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0328939.1 |