Miyakogusa Predicted Gene

Lj0g3v0328729.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KPS9_MEDTR 986 64.7 77.5 (tr|G7KPS9) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_6g069480 PE=4 SV=1
TAIR_pep AT1G76280.3 658 48.9 64.5 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:28617948-28622581 REVERSE LENGTH=801
Medicago Medtr6g069480.3 1003 67.5 80.9 | PPR containing plant-like protein | HC | chr6:25013140-25021600 | 20130731
Soybean Glyma14g39830.1 854 61.3 74.0  
LJGI gnl|LJGI|TC63037 1195 100.0 100.0 weakly similar to UniRef100_A7NVU0 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0328729.1 length: 739 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.073 14-34
256-285
359-384
550-578
HMMPfam PF13041 PPR_2 8.3e-09 480-523
HMMTigr TIGR00756 PPR: 0.00021 256-288
515-546
ProfileScan PS51375 PPR 5.546 9-44
45-75
114-148
253-287
288-322
355-389
477-511
512-546
547-581
582-616
617-656
no_ID  
HMMPanther PTHR24015 FAMILY 5.3e-59 1-642
HMMPanther PTHR24015:SF0 SUBFAMILY 5.3e-59 1-642
Seg seg seg NA 42-54
Wolf-PSORT
Lj0g3v0328729.1	nucl 7, cyto 5, plas 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0328729.1