Miyakogusa Predicted Gene

Lj0g3v0328649.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C6TJB7_SOYBN 409 94.4 97.7 (tr|C6TJB7) Uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep AT1G43890.3 365 89.4 94.4 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1, RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395 FORWARD LENGTH=212
Medicago Medtr1g029450.1 390 92.1 96.1 | small GTPase family RAB protein | HC | chr1:10110413-10114701 | 20130731
Soybean Glyma14g26690.1 409 94.4 97.7  
LJGI gnl|LJGI|TC58877 1285 100.0 100.0 homologue to UniRef100_A7NSN5 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (98%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0328649.1 length: 214 aa.
IPR001806 Small GTPase superfamily
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
FPrintScan PR00449 RASTRNSFRMNG 1e-35 17-38
39-55
57-79
121-134
156-178
HMMPfam PF00071 Ras 3.5e-56 18-179
IPR002041 Ran GTPase
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0006913 nucleocytoplasmic transport    
Biological Process GO:0007165 signal transduction    
HMMSmart SM00176 Ran 1e-05 22-214
IPR003578 Small GTPase superfamily, Rho type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00174 Rho 7.8e-14 19-181
IPR003579 Small GTPase superfamily, Rab type
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 Rab 2e-95 17-181
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 2.8e-30 15-173
IPR020849 Small GTPase superfamily, Ras type
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Biological Process GO:0007165 signal transduction    
Cellular Component GO:0016020 membrane    
HMMSmart SM00173 Ras 5.2e-32 14-181
IPR024156 Small GTPase superfamily, ARF type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00177 ARF-like 0.0024 1-182
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 5.1e-64 12-212
no_ID  
Gene3D G3DSA:3.40.50.300 no description 4.6e-67 9-212
HMMPanther PTHR24073 FAMILY 3e-119 3-213
HMMPanther PTHR24073:SF285SUBFAMILY NOT 3e-119 3-213
ProfileScan PS51419 RAB 32.808 12-212
Wolf-PSORT
Lj0g3v0328649.1	nucl 6, chlo 5, cyto 1, extr 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0328649.1