Miyakogusa Predicted Gene

Lj0g3v0328559.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1JNH0_SOYBN 318 65.9 80.6 (tr|I1JNH0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G42290.1 273 56.6 70.1 | Symbols: | Leucine-rich repeat protein kinase family protein | chr2:17616992-17619472 REVERSE LENGTH=646
Medicago Medtr1g052425.1 313 64.6 77.2 | LRR receptor-like kinase | HC | chr1:21282482-21286226 | 20130731
Soybean Glyma03g29740.1 318 65.9 80.6  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0328559.1 length: 378 aa.
IPR003591 Leucine-rich repeat, typical subtype
method AccNumber shortName E-value location
HMMSmart SM00369 Leucine-rich 6.9 85-109
134-157
IPR013210 Leucine-rich repeat-containing N-terminal, type 2
HMMPfam PF08263 LRRNT_2 2.5e-12 19-60
no_ID  
FPrintScan PR00019 LEURICHRPT 1e-05 113-126
134-147
Gene3D G3DSA:3.80.10.10 no description 5.5e-47 21-202
HMMPanther PTHR24420 FAMILY 1.1e-107 56-358
HMMPanther PTHR24420:SF285SUBFAMILY NOT 1.1e-107 56-358
HMMPfam PF13855 LRR_8 2.9e-10 86-147
Seg seg seg NA 266-288
291-297
299-327
328-339
351-365
superfamily SSF52058 L 2.6e-45 17-229
Putative transmembrane regions
  From To
TM segments
SOSUI
1 23
267 289
Wolf-PSORT
Lj0g3v0328559.1	plas 7, vacu 3, E.R. 2, mito 1, extr 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0328559.1 Not targeted -48.284 -0.830 -14.178 71.23% -33.277