Miyakogusa Predicted Gene

Lj0g3v0328439.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J381_MEDTR 946 81.3 87.3 (tr|G7J381) LMBR1 domain-containing protein-like protein OS=Medicago truncatula GN=MTR_3g086840 PE=4 SV=1
TAIR_pep AT5G65290.1 760 66.4 77.8 | Symbols: | LMBR1-like membrane protein | chr5:26089814-26094337 FORWARD LENGTH=733
Medicago Medtr3g086840.1 946 81.3 87.3 | LMBR1 integral membrane-like protein | HC | chr3:39370616-39360812 | 20130731
Soybean Glyma11g37940.1 919 80.5 87.6  
LJGI gnl|LJGI|TC66542 573 99.3 99.3 similar to UniRef100_A7R1G9 Cluster: Chromosome undetermined scaffold_354, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_354, whole genome shotgun sequence - Vitis vinifera (Grape), partial (15%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0328439.2 length: 554 aa.
IPR006876 LMBR1-like membrane protein
method AccNumber shortName E-value location
HMMPfam PF04791 LMBR1 1.6e-19 2-348
no_ID  
Coil coil coiled-coil NA 113-141
HMMPanther PTHR21355 UNCHARACTERIZED 8.4e-136 1-448
Seg seg seg NA 521-532
Putative transmembrane regions
  From To
TM segments
SOSUI		 3 25
200 222
228 250
255 277
281 303
Wolf-PSORT
Lj0g3v0328439.2	plas 10, vacu 2, E.R. 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0328439.2