Miyakogusa Predicted Gene

Lj0g3v0328009.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL --No_Hits--

TAIR_pep AT5G50390.1 50.8 66.7 93.3 | Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr5:20520789-20522980 REVERSE LENGTH=701

Medicago --No_Hits--

Soybean Glyma08g17040.1 48.9 69.2 96.2

LJGI gnl|LJGI|GO036292 107 92.3 92.3 weakly similar to UniRef100_Q9LP03 Cluster: F9C16.15; n=1; Arabidopsis thaliana|Rep: F9C16.15 - Arabidopsis thaliana (Mouse-ear cress), partial (3%)

Putative transmembrane regions

From To

TM segments
SOSUI 114 136

Wolf-PSORT

Lj0g3v0328009.1 nucl 4, chlo 3, mito 3, cyto_nucl 3, chlo_mito 3

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0328009.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	--No_Hits--
TAIR_pep	AT5G50390.1	50.8	66.7	93.3	\| Symbols: \| Pentatricopeptide repeat (PPR-like) superfamily protein \| chr5:20520789-20522980 REVERSE LENGTH=701
Medicago	--No_Hits--
Soybean	Glyma08g17040.1	48.9	69.2	96.2
LJGI	gnl\|LJGI\|GO036292	107	92.3	92.3	weakly similar to UniRef100_Q9LP03 Cluster: F9C16.15; n=1; Arabidopsis thaliana\|Rep: F9C16.15 - Arabidopsis thaliana (Mouse-ear cress), partial (3%)