Miyakogusa Predicted Gene

Lj0g3v0327979.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K3M7_SOYBN 1146 82.6 89.3 (tr|I1K3M7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G27320.1 972 72.5 83.2 | Symbols: AHK3, HK3 | histidine kinase 3 | chr1:9487780-9492027 FORWARD LENGTH=1036
Medicago Medtr3g085130.1 1099 78.7 87.4 | cytokinin receptor histidine kinase | HC | chr3:38464457-38458741 | 20130731
Soybean Glyma05g28070.1 1146 82.6 89.3  
LJGI gnl|LJGI|TC60023 1178 99.5 99.5 similar to UniRef100_Q000L4 Cluster: Histidine kinase 1; n=1; Lupinus albus|Rep: Histidine kinase 1 - Lupinus albus (White lupin), partial (48%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0327979.1 length: 677 aa.
IPR003594 Histidine kinase-like ATPase, ATP-binding domain
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Gene3D G3DSA:3.30.565.10 no description 9.7e-39 598-670
HMMPfam PF02518 HATPase_c 6.4e-30 511-673
HMMSmart SM00387 Histidine 2.3e-32 511-675
superfamily SSF55874 ATPase 1.3e-38 453-670
IPR003661 Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
Molecular Function GO:0000155 phosphorelay sensor kinase activity    
Biological Process GO:0007165 signal transduction    
Cellular Component GO:0016020 membrane    
HMMPfam PF00512 HisKA 2.8e-19 399-462
HMMSmart SM00388 His 6.9e-23 399-464
IPR004358 Signal transduction histidine kinase-related protein, C-terminal
Biological Process GO:0016310 phosphorylation    
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups    
FPrintScan PR00344 BCTRLSENSOR 9.9e-13 600-614
618-628
635-653
659-672
IPR005467 Signal transduction histidine kinase, core
ProfileScan PS50109 HIS_KIN 40.705 406-675
IPR006189 CHASE
HMMPfam PF03924 CHASE 5.6e-43 113-313
HMMSmart SM01079 no description 8.6e-26 112-313
ProfileScan PS50839 CHASE 38.392 112-338
IPR009082 Signal transduction histidine kinase, homodimeric domain
Molecular Function GO:0004871 signal transducer activity    
Biological Process GO:0007165 signal transduction    
Gene3D G3DSA:1.10.287.130 no description 8.3e-14 391-460
superfamily SSF47384 Homodimeric 2.1e-20 381-466
no_ID  
Coil coil coiled-coil NA 376-397
HMMPanther PTHR24423 TWO 1.2e-82 58-671
HMMPanther PTHR24423:SF360HYBRID SIGNAL 1.2e-82 58-671
Seg seg seg NA 543-552
589-595
Putative transmembrane regions
  From To
TM segments
SOSUI		 44 65
352 374
Wolf-PSORT
Lj0g3v0327979.1	plas 8.5, cyto_plas 5, mito 1, extr 1, E.R. 1, pero 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0327979.1