Miyakogusa Predicted Gene

Lj0g3v0326949.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7LDQ8_MEDTR 160 90.2 96.3 (tr|G7LDQ8) Translation initiation factor OS=Medicago truncatula GN=MTR_8g061130 PE=3 SV=1
TAIR_pep AT4G11175.1 108 70.4 84.5 | Symbols: | Nucleic acid-binding, OB-fold-like protein | chr4:6818162-6818806 FORWARD LENGTH=141
Medicago Medtr8g061130.1 160 90.2 96.3 | translation initiation factor IF-1 | HC | chr8:21190038-21189155 | 20130731
Soybean Glyma17g08790.1 146 89.5 96.1  
LJGI gnl|LJGI|TC72935 846 100.0 100.0 homologue to UniRef100_Q94KR7 Cluster: Translation initiation factor IF-1, chloroplast precursor; n=1; Glycine max|Rep: Translation initiation factor IF-1, chloroplast precursor - Glycine max (Soybean), partial (53%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0326949.1 length: 141 aa.
IPR004368 Translation initiation factor IF-1
method AccNumber shortName E-value location
Molecular Function GO:0003743 translation initiation factor activity    
Biological Process GO:0006413 translational initiation    
HAMAP MF_00075 IF_1 22.627 63-134
HMMTigr TIGR00008 infA: 1.5e-34 66-133
IPR006196 RNA-binding domain, S1, IF1 type
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003743 translation initiation factor activity    
Biological Process GO:0006413 translational initiation    
HMMPfam PF01176 eIF-1a 9.7e-22 72-132
ProfileScan PS50832 S1_IF1_TYPE 19.849 72-134
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 2.3e-30 62-133
superfamily SSF50249 Nucleic 2.7e-25 63-133
IPR022967 RNA-binding domain, S1
HMMSmart SM00316 Ribosomal 0.00025 66-134
no_ID  
Seg seg seg NA 11-31
36-59
Wolf-PSORT
Lj0g3v0326949.1	mito 6.5, chlo_mito 6, chlo 4.5, nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0326949.1